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Posts Tagged ‘antibiotic’


Portable device provides rapid, accurate diagnosis of tuberculosis, other bacterial infections

A handheld diagnostic device first developed to diagnose cancer has been adapted to rapidly diagnose tuberculosis and other important infectious bacteria. Two versions of the portable device combine microfluidic technology with nuclear magnetic resonance to not only diagnose these important infections but also determine the presence of antibiotic-resistant bacterial strains.

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Eradicating bacteria linked to gastric cancer

In an analysis of the results of interventions to eradicate the bacterium Helicobacter pylori (a risk factor for gastric cancer) in seven diverse community populations in Latin America, researchers found that geographic site, demographic factors, adherence to initial therapy and infection recurrence may be as important as the choice of antibiotic regimen in H pylori eradication interventions, according to a new study.

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Gene find turns soldier beetle defense into biotech opportunity

New antibiotic and anti-cancer chemicals may one day be synthesized using biotechnology, following a discovery of the three genes that combine to provide soldier beetles with their potent predator defense system.

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Cancer drugs may also combat antibiotic resistance

Washington, Dec 25 : Drugs used for cancer treatment may also help in combating antibiotic resistance, a new study has revealed.

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Drugs Used To Overcome Cancer May Also Combat Antibiotic Resistance

Drugs used to overcome cancer may also combat antibiotic resistance, finds a new study led by Gerry Wright, scientific director of the Michael G. DeGroote Institute for Infectious Disease Research at McMaster University…

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Pediatric brain tumors: Regulatory protein represents potential drug target

Researchers have shown that the protein FoxM1 is essential for the growth of medulloblastomas, the most common type of malignant brain tumor in children. The antibiotic siomycin A specifically inhibits the expression of FoxM1 and might therefore provide an effective treatment for the disease.

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Genomics In The Journals

NEW YORK (GenomeWeb News) American and Saudi Arabian researchers detected germline mutations in the BRCA1-associated protein-coding gene BAP1 that appear to predispose individuals to malignant mesothelioma, a cancer that’s often associated with asbestos or erionite exposure. they first identified the mutations using array comparative genomic hybridization to test one tumor per family in two American families with high rates of mesothelioma and other cancers, but no known asbestos or erionite contact. during their subsequent linkage and targeted sequencing experiments, the researchers found examples of both germline and somatic BAP1 mutations in affected family members. they also tracked down somatic BAP1 mutations in unrelated individuals with no family history of mesothelioma. Several individuals with familial or sporadic BAP1 mutations and mesothelioma had also been diagnosed with the eye cancer uveal melanoma, leading authors of the Nature Genetics study to speculate that the BAP1-associated cancer syndrome takes various forms depending on an individual’s exposures. “[W]e demonstrate the existence of a BAP1-related cancer syndrome characterized by mesothelioma, uveal melanoma, and possibly other cancer types,” senior author Michele Carbone, a researcher at the University of Hawaii Cancer Center, and co-authors wrote. “We hypothesize that when individuals with BAP1 mutations are exposed to asbestos, mesothelioma predominates. Alternatively, BAP1 mutation alone may be sufficient to cause mesothelioma.” In another Nature Genetics paper, members of the Brassica rapa Genome Sequencing Project Consortium report in that they have sequenced, annotated, and analyzed the draft genome of a Chinese cabbage line known as Chiifu-401-42. the plant belongs to a group that split from the lineage leading to Arabidopsis thaliana some 13 to 17 million years ago and has since experienced genome triplication. Using Illumina GAII paired-end and BAC-end sequence data, the group sequenced and assembled the nearly 284 base pair genome, which contains an estimated 41,174 protein coding genes. around 1,000 of these genes seem specific to the B. rapa lineage, they reported, while nearly 16,000 overlap with those in A. thaliana, and thousands more are shared with papaya and grape vine plants as well. By looking at gene loss and other patterns in the genome, the team is learning more about oilseed crop biology, the consequences of genome triplication, and plant evolution in general. In Nature, an international team describes the genome-wide association approach that it used to look for genetic factors influencing metabolite characteristics and concentrations in the blood. the researchers assessed 1,768 individuals enrolled through the KORA F4 study in Germany and 1,052 participants from the British TwinsUK study who were genotyped at around 600,000 SNPs with Affymetrix or Illumina arrays. Using this genetic information coupled with data on more than 250 metabolites in the individuals’ fasting blood serum samples generated with Metabolon’s metabolic profiling and analysis platform the researchers identified 37 loci showing genome-wide significant associations with metabolite patterns. From their findings so far, the team said these associations may be relevant for understanding past GWAS results on everything from heart disease and type 2 diabetes to cancer, kidney conditions, and Crohn’s disease, since several metabolite-associated loci overlap with those found in disease studies. “The study advances our knowledge of the genetic basis of metabolic individuality in humans and generates many new hypotheses for biomedical and pharmaceutical research,” co-senior author Christian Gieger, a genetic epidemiology researcher at the German Research Centre for Environmental Health’s Helmholtz Center Munich, and co-authors wrote. Bacteria have had the genetic wherewithal to resist some antibiotics for 30,000 years or more, according to a Nature study by researchers in Canada and France. the team used Roche 454 GS FLX or Sanger sequencing to do metagenomic analyses on ancient bacterial DNA from permafrost samples collected near Dawson City in Canada’s Yukon Territories. After verifying the age of the samples by amplifying bits of plant and animal sequence, the team did deep 16S rRNA sequencing to identify bacteria in the samples, followed by assays to find sequences representing antibiotic resistance genes. among them were genes contributing to vancomycin resistance that the team expressed and purified and found to be active in the lab setting. Those involved said the results hint that bacteria adapted to the presence of some antibiotic chemicals in the environment long before the compounds found favor in a therapeutic setting. “Antibiotics are part of the natural ecology of the planet so when we think that we have developed some drug that won’t be susceptible to resistance or some new thing to use in medicine, we are completely kidding ourselves,” senior author Gerard Wright, scientific director of McMaster University’s Michael G. DeGroote Institute for Infectious Disease Research, said in a statement. “Microorganisms have figured out a way of how to get around them well before we even figured out how to use them.” Genomics In the Journals is a weekly feature pointing readers to select, recently published articles involving genomics and related research.

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The Meningitis

Clinical Presentation: Symptoms commonly associated with both microbe and viral meningitis consist of acute onset of fever, headache, neck stiffness (meningismus), photophobia, and confusion. Microbe meningitis brings about significant morbidity (neurologic sequelae, particularly sensorineural hearing loss) and mortality and thus requires immediate antibiotic treatment. With rare exceptions, only supportive care with analgesics is essential for viral meningitis. because the clinical presentations of microbe and viral meningitis might be indistinguishable, laboratory studies from the cerebrospinal fluid are critical in differentiating these entities. Cerebrospinal fluid leukocyte pleocytosis (white blood cells in the cerebrospinal fluid) may be the hallmark of meningitis. Microbe meningitis is generally characterized by neutrophilic pleocytosis (predominance of polymorphonuclear neutrophils in the cerebrospinal fluid). Typical causes of lymphocytic pleocytosis include viral infections (eg, enterovirus, West Nile virus), fungal infections (eg, cryptococcus in HIV-infected persons), and spirochetal infections (eg, neurosyphilis or Lyme neuroborreliosis). Noninfectious brings about this kind of as cancer, connective tissue diseases, and hypersensitivity reactions to drugs can also trigger lymphocytic pleocytosis. The cerebrospinal fluid in bacterial meningitis is usually characterized by marked elevations in protein concentration, an very reduced glucose level, and, in the absence of previous antibiotic treatment, a positive Gram stain for bacteria. However, there is frequently substantial overlap between the cerebrospinal fluid findings in bacterial and nonbacterial meningitis, and differentiating these entities at presentation is really a significant clinical challenge. Etiology: The microbiology of microbe meningitis within the United States has changed dramatically following the introduction from the Haemophilus influenzae conjugate vaccine. The routine use of this vaccine in the pediatric population has essentially eliminated H influenzae as a trigger of meningitis, resulting in a shift in median age among sufferers with microbe meningitis from 9 months to 25 years. Microbe agents causing meningitis vary according to host age. In infants younger than 3 months, E coli, Listeria, and group B streptococci are the most common brings about of meningitis. For kids three months to 18 many years of age, S pneumoniae and N meningitidis are the most common brings about, with H influenzae a concern between nonimmunized kids. For adults aged 18-50 many years, S pneumoniae and N meningitidis are the leading brings about of meningitis, whereas the elderly are at chance for those pathogens as well as for Listeria. Additional bacteria should be considered for postneurosurgery sufferers (S aureus, P aeruginosa), sufferers with ventricular shunts (S epidermidis, S aureus, gram-negative bacilli), pregnant patients (Listeria), or neutropenic sufferers (gram-negative bacilli, including P aeruginosa). Subacute or chronic meningitides may be caused by M tuberculosis, fungi (eg, Coccidioides immitis, Cryptococcus neoformans), and spirochetes such as Treponema pallidum (the bacterium causing syphilis) or Borrelia burgdorferi (the bacterium causing Lyme disease). The diagnosis of meningitis triggered by these organisms may be delayed simply because many of these pathogens are difficult to culture and need special serologic or molecular diagnostic techniques. Pathogenesis: The pathogenesis of bacterial meningitis involves a sequence of events in which virulent microorganisms overcome the host defense mechanisms. Most instances of bacterial meningitis begin with bacterial colonization of the nasopharynx. an exception is Listeria, which enters the bloodstream via ingestion of contaminated food. Pathogenic bacteria such as S pneumoniae and N meningitidis secrete an IgA protease that inactivates host antibody and facilitates mucosal attachment. many of the causal pathogens also possess surface characteristics that enhance mucosal colonization. N meningitidis binds to nonciliated epithelial cells by finger-like projections known as pili. Once the mucosal barrier is breached, bacteria obtain access to the bloodstream, where they should overcome host defense mechanisms to survive and invade the CNS. The bacterial capsule, a feature typical to N meningitidis, H influenzae, and S pneumoniae, is probably the most important virulence factor in this regard. Host defenses counteract the protective effects of the pneumococcal capsule by activating the alternative complement pathway, resulting in C3b activation, opsonization, phagocytosis, and intravascular clearance from the organism. This defense mechanism is impaired in patients who have undergone splenectomy, and this kind of patients are predisposed to the development of overwhelming bacteremia and meningitis with encapsulated bacteria. Activation from the accentuate system membrane attack complex is an essential host defense mechanism against invasive disease by N meningitidis, and sufferers with deficiencies from the late accentuate components (C5-9) are at elevated chance for meningococcal meningitis. The mechanisms by which bacterial pathogens obtain access to the CNS are largely unknown. Experimental studies suggest that receptors for microbe pathogens are present on cells within the choroid plexus, which might facilitate movement of these pathogens to the subarachnoid space. Invasion from the spinal fluid by a meningeal pathogen results in elevated permeability of the blood-brain barrier, with leakage of albumin to the subarachnoid room, wherever local host defense mechanisms are inadequate to control the infection. Usually, complement elements are minimal or absent in the cerebrospinal fluid. Meningeal inflammation leads to increased, but still reduced, concentrations of complement, inadequate for opsonization, phagocytosis, and removal of encapsulated meningeal pathogens. Immunoglobulin concentrations are also reduced in the cerebrospinal fluid, with an average blood to cerebrospinal fluid IgG ratio of 800:1. Although the absolute quantity of immunoglobulin within the cerebrospinal fluid increases with infection, the ratio of immunoglobulin within the cerebrospinal fluid relative to that in the serum remains low. The ability of meningeal pathogens to induce a marked subarachnoid space inflammatory response contributes to many from the pathophysiologic consequences of bacterial meningitis. Although the microbe capsule is largely responsible for intravascular and cerebrospinal fluid survival from the pathogens, the subcapsular surface elements (ie, the cell wall and lipopolysaccharide) of bacteria are more essential determinants of meningeal inflammation. The major mediators of the inflammatory process are thought to be IL-1, IL-6, matrix metalloproteinases, and tumor necrosis aspect (TNF). Within 1-3 hours after intracisternal inoculation of purified lipopolysaccharide in an animal model, there’s a brisk release of TNF and IL-1 to the cerebrospinal fluid, preceding the improvement of inflammation. indeed, direct inoculation of TNF and IL-1 to the cerebrospinal fluid produces an inflammatory cascade identical to that seen with experimental bacterial infection. Cytokine and proteolytic enzyme release leads to loss of membrane integrity, with resultant cellular swelling. The improvement of cerebral edema contributes to an increase in intracranial pressure, potentially resulting in life-threatening cerebral herniation. Vasogenic cerebral edema is principally caused by the increase in blood-brain barrier permeability. Cytotoxic cerebral edema results from swelling from the cellular elements from the brain simply because of toxic factors from bacteria or neutrophils. Interstitial cerebral edema reflects obstruction of flow of cerebrospinal fluid, as in hydrocephalus. The literature suggests that oxygen free radicals and nitric oxide might also be important mediators in cerebral edema. Other complications of meningitis consist of cerebral vasculitis with alterations in cerebral blood flow. The vasculitis leads to narrowing or thrombosis of cerebral blood vessels, resulting in ischemia and feasible brain infarction. Understanding the pathophysiology of bacterial meningitis has therapeutic implications. Even though bactericidal antibiotic treatment is critical for adequate treatment, rapid bacterial killing releases inflammatory bacterial fragments, potentially exacerbating inflammation and abnormalities of the cerebral microvasculature. In animal models, antibiotic treatment has been shown to cause rapid bacteriolysis and release of microbe endotoxin, resulting in increased cerebrospinal fluid inflammation and cerebral edema. The importance of the immune response in triggering cerebral edema has led researchers to study the role of adjuvant anti-inflammatory medications for bacterial meningitis. The use of corticosteroids has been shown to decrease the chance of sensorineural hearing loss between kids with H influenzae meningitis and mortality among adults with pneumococcal meningitis, and these agents are routinely given at the time of initial antibiotic therapy. Clinical Manifestations: Between sufferers who produce community-acquired bacterial meningitis, an antecedent upper respiratory tract infection is typical. Sufferers having a history of head injury or neurosurgery, especially those having a persistent cerebrospinal fluid leak, are at particularly high risk for meningitis. Manifestations of meningitis in infants may be hard to recognize and interpret; consequently, the physician should be alert towards the possibility of meningitis in the evaluation of any febrile neonate. Most sufferers with meningitis have a rapid onset of fever, headache, lethargy, and confusion. Fewer than half complain of neck stiffness, but nuchal rigidity is noted on physical examination in 30-70%. Other clues seen in a variable proportion of instances include altered mental status, nausea or vomiting, photophobia, Kernig’s sign (resistance to passive extension from the flexed leg with the patient lying supine), and Brudzinski’s sign (involuntary flexion of the hip and knee when the examiner passively flexes the patient’s neck). More than half of patients with meningococcemia produce a characteristic petechial or purpuric rash, predominantly on the extremities. although a change in mental status (lethargy, confusion) is typical in bacterial meningitis, up to one third of patients present with normal mentation. From 10% to 30% of sufferers have cranial nerve dysfunction, focal neurologic signs, or seizures. Coma, papilledema, and Cushing’s triad (bradycardia, respiratory depression, and hypertension) are ominous signs of impending herniation (brain displacement through the foramen magnum with brain stem compression), heralding imminent death. Any patient suspected of having meningitis demands emergent lumbar puncture for Gram stain and culture from the cerebrospinal fluid, followed immediately by the administration of antibiotics and corticosteroids. Alternatively, if a focal neurologic process (eg, brain abscess) is suspected, antibiotics should be initiated immediately, followed by brain imaging (computed tomography or magnetic resonance imaging) and lumbar puncture performed only if there is no radiologic contraindication.

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Insight into new drug resistance in hospital microbes

Hospitals struggle to prevent the infections that complicate treatment for cancer, joint replacement, heart surgery and other conditions. Hospital-acquired infections are often resistant to multiple antibiotics, leading to approximately 100,000 deaths and more than $30 billion in additional health care costs yearly. New drugs are being developed to combat these infections, but resistance invariably emerges to these last-line drugs. Daptomycin, a new antibiotic approved by the FDA in 2003, is used to treat infections caused by multi-drug resistant bacteria, including staph and microbes known as enterococci.

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Price Breaks Kick In For ‘Pre-Existing Condition’ Insurance

… coverage was impossible. Compounding her medical problems, in 2009 Watson was diagnosed with non-Hodgkin lymphoma, and subsequently developed an antibiotic-resistant bacterial infection that occurred when she was hospitalized with …

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